Skip to content
@AllenInstitute

Allen Institute

Please visit http://alleninstitute.github.io/ for more information.

Pinned Loading

  1. AllenSDK AllenSDK Public

    code for reading and processing Allen Institute for Brain Science data

    Jupyter Notebook 358 152

  2. dipde dipde Public

    Numerical solver for coupled population density equations

    Python 24 14

Repositories

Showing 10 of 422 repositories
  • aibs-informatics-core Public

    Core library to be used as foundation across multiple projects

    AllenInstitute/aibs-informatics-core’s past year of commit activity
    Python 2 0 0 2 Updated Apr 23, 2025
  • compute_motion_energy Public

    Step 2 of Behavior Video QC pipeline. Loads video Barr files and computes motion energy in 3d and

    AllenInstitute/compute_motion_energy’s past year of commit activity
    Jupyter Notebook 0 0 2 0 Updated Apr 23, 2025
  • cell_type_constellations Public Forked from danielsf/cell_type_constellations

    Prototype utilities for creating constellation plots based on cell type taxonomies.

    AllenInstitute/cell_type_constellations’s past year of commit activity
    Python 0 2 0 0 Updated Apr 23, 2025
  • vis Public

    Typescript packages for building big-data visualization tools & components, with examples for a variety of common data types & formats

    AllenInstitute/vis’s past year of commit activity
    TypeScript 5 BSD-3-Clause 1 7 7 Updated Apr 23, 2025
  • scrattch.mapping Public

    Genearlized mapping scripts for RNA-seq and Patch-seq data

    AllenInstitute/scrattch.mapping’s past year of commit activity
    R 13 2 9 0 Updated Apr 23, 2025
  • dynamic_routing_analysis Public

    Tools for accessing, processing and presenting data from Dynamic Routing experiments.

    AllenInstitute/dynamic_routing_analysis’s past year of commit activity
    Jupyter Notebook 2 0 0 0 Updated Apr 23, 2025
  • deep-neurographs Public

    A Python package that corrects split mistakes in a fragmented neuron segmentation using a graph neural network.

    AllenInstitute/deep-neurographs’s past year of commit activity
    Python 4 MIT 0 0 0 Updated Apr 23, 2025
  • abc_atlas_access Public

    Documentation and examples demonstrating how to access data from the Allen Brain Cell Atlas

    AllenInstitute/abc_atlas_access’s past year of commit activity
    Jupyter Notebook 68 26 15 5 Updated Apr 23, 2025
  • MIES Public

    Multichannel Igor Electrophysiology Suite

    AllenInstitute/MIES’s past year of commit activity
    IGOR Pro 26 9 297 11 Updated Apr 23, 2025
  • aibs-informatics-aws-lambda Public

    AWS Lambda library for AIBS Informatics lambda functions

    AllenInstitute/aibs-informatics-aws-lambda’s past year of commit activity
    Python 1 0 0 0 Updated Apr 23, 2025

Top languages

Loading…

Most used topics

Loading…